Effect of substituents on the excited-state dynamics of the modified DNA bases 2,4-diaminopyrimidine and 2,6-diaminopurine

  • Zsolt Gengeliczki
  • , Michael P. Callahan
  • , Nathan Svadlenak
  • , Csaba István Pongor
  • , Bálint Sztáray
  • , Leo Meerts
  • , Dana Nachtigallová
  • , Pavel Hobza
  • , Mario Barbatti
  • , Hans Lischka
  • , Mattanjah S. de Vries

Research output: Contribution to journalArticlepeer-review

35 Scopus citations

Abstract

To explore the excited state dynamics of pyrimidine derivatives, we performed a combined experimental and theoretical study. We present resonant two-photon ionization (R2PI) and IR-UV double resonance spectra of 2,4-diaminopyrimidine and 2,6-diaminopurine seeded in a supersonic jet by laser desorption. For 2,4-diaminopyrimidine (S0→ S1 34 459 cm-1), we observed only the diamino tautomer with an excited state lifetime bracketed between experimental limits of 10 ps and 1 ns. For 2,6-diaminopurine, we observed two tautomers, the 9H- (S0→ S1 34 881 cm-1) and 7H- (S0→ S1 32 215 cm-1) diamino forms, with excited state lifetimes of 6.3 ± 0.4 ns and 8.7 ± 0.8 ns, respectively. We investigated the nature of the excited state of 2,4-diaminopyrimidine by means of multi-reference ab initio methods. The calculations of stationary points in the ground and excited states, minima on the S0/S1 crossing seam and connecting reaction paths show that several paths with negligible barriers exist, allowing ultrafast radiationless deactivation if excited at energies slightly higher than the band origin. The sub-nanosecond lifetime found experimentally is in good agreement with this finding.

Original languageEnglish
Pages (from-to)5375-5388
Number of pages14
JournalPhysical Chemistry Chemical Physics
Volume12
Issue number20
DOIs
StatePublished - 2010

Keywords

  • 2-Aminopurine/analogs & derivatives
  • DNA/chemistry
  • Models, Theoretical
  • Photoelectron Spectroscopy
  • Pyrimidines/chemistry
  • Quantum Theory

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