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Open-Source Molecular Modeling Software in Chemical Engineering Focusing on the Molecular Simulation Design Framework

  • Peter T. Cummings
  • , Clare McCabe
  • , Christopher R. Iacovella
  • , Akos Ledeczi
  • , Eric Jankowski
  • , Arthi Jayaraman
  • , Jeremy C. Palmer
  • , Edward J. Maginn
  • , Sharon C. Glotzer
  • , Joshua A. Anderson
  • , J. Ilja Siepmann
  • , Jeffrey Potoff
  • , Ray A. Matsumoto
  • , Justin B. Gilmer
  • , Ryan S. DeFever
  • , Ramanish Singh
  • , Brad Crawford
  • Vanderbilt University
  • University of Delaware
  • University of Houston
  • University of Notre Dame
  • University of Michigan, Ann Arbor
  • University of Minnesota Twin Cities
  • Wayne State University

Research output: Contribution to journalArticlepeer-review

36 Scopus citations
37 Downloads (Pure)

Abstract

Molecular simulation has emerged as an important sub-field of chemical engineering, due in no small part to the leadership of Keith Gubbins. A characteristic of the chemical engineering molecular simulation community is the commitment to freely share simulation codes and other key software components required to perform a molecular simulation under open-source licenses and distribution on public repositories such as GitHub. Here we provide an overview of opensource molecular modeling software in Chemical Engineering, with focus on the Molecular Simulation Design Framework (MoSDeF). MoSDeF is an open-source Python software stack that enables facile use of multiple open-source molecular simulation engines, while at the same time ensuring maximum reproducibility.

Original languageAmerican English
Article numbere17206
JournalAlChE Journal
Volume67
Issue number3
DOIs
StatePublished - Mar 2021

Keywords

  • adsorption/gas
  • computer simulations (MC and MD)
  • simulation - molecular
  • thermodynamics/statistical

EGS Disciplines

  • Materials Science and Engineering

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